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BALSAMIC documentation

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BALSAMIC documentation

Getting started

Installation
Short tutorial
Command line arguments

Detailed documentation

Calling and filtering variants
Structural and Copy Number variants
Annotation resources
Method description
Changelog
Tools and software
References and other resources

Development guide

Git etiquette
Snakemake etiquette
Build doc
Semantic versioning
Frequently Asked Questions (FAQs)

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Command line arguments¶

Calling and filtering variants

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